Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
4
WGBS
3
ATAC-seq
1
RNA microarray
1
pCHi-C
Assay category
55
DNA binding
4
DNA methylation
3
DNA accessibility
Target of assay
31
histone
31
histone modification
24
control
20
broad histone mark
11
narrow histone mark
Date released
41
August, 2017
18
October, 2018
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
October, 2019
Available data
21
fastq
19
bam
8
tagAlign
3
bigWig
2
bed narrowPeak
1
bed broadPeak
1
bedpe bed3+
1
bigBed narrowPeak
tsv
Organism
63
Homo sapiens
Biosample type
63
tissue
1
in vitro differentiated cells
Organ
229
pancreas
228
liver
167
epithelium
110
connective tissue
89
bone element
88
kidney
64
adipose tissue
55
brain
40
musculature of body
36
eye
35
vasculature
33
blood vessel
29
heart
23
limb
19
lung
15
blood
15
bodily fluid
11
nerve
10
vein
9
artery
8
embryo
spleen
4
gonad
4
ovary
4
skeleton
1
bone marrow
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
64
AMP
Genome assembly (visualization)
27
hg19
GRCh38
Lab
64
AMP-T2D consortium
assay_title!
total RNA-seq
assembly!
GRCh38
files.file_type!
tsv
organ_slims!
spleen
BIOSAMPLE
ASSAY
64 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
RNA microarray
pCHi-C
tissue
subcutaneous abdominal adipose tissue
36
3
subcutaneous adipose tissue
10
1
omental fat pad
8
adipose tissue
1
1
3
in vitro differentiated cells
white fat cell
1
Download