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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
4
ChIP-seq
Assay category
9
DNA accessibility
4
DNA binding
Target of assay
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
5
June, 2019
4
October, 2019
3
May, 2019
1
November, 2017
Available data
63
bed narrowPeak
29
bam
21
bigWig
13
bigBed narrowPeak
10
bed broadPeak
10
bigBed broadPeak
9
bed bed3+
4
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
fastq
Organism
13
Homo sapiens
Biosample type
8
tissue
5
primary cell
Organ
291
liver
81
kidney
53
blood
53
bodily fluid
46
epithelium
40
pancreas
38
heart
36
limb
35
brain
33
musculature of body
18
ureter
16
connective tissue
16
vasculature
13
blood vessel
8
adipose tissue
7
spleen
5
artery
5
eye
2
nerve
2
vein
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
13
AMP-T2D consortium
assay_title!
total RNA-seq
target.investigated_as!
histone
BIOSAMPLE
ASSAY
13 results
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DNase-seq
ChIP-seq
tissue
coronary artery
2
1
ascending aorta
1
1
tibial artery
2
thoracic aorta
1
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
kidney capillary endothelial cell
1
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