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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
122
ChIP-seq
27
ATAC-seq
Assay category
122
DNA binding
27
DNA accessibility
Target of assay
118
histone
118
histone modification
61
broad histone mark
57
narrow histone mark
4
transcription factor
Date released
280
November, 2017
210
June, 2019
191
October, 2019
160
August, 2017
103
May, 2021
96
May, 2019
90
August, 2021
79
November, 2018
77
December, 2017
64
April, 2019
49
April, 2018
48
July, 2018
46
September, 2018
45
October, 2018
40
May, 2024
37
November, 2019
35
February, 2023
35
July, 2019
30
December, 2018
23
February, 2021
21
January, 2019
19
May, 2020
16
February, 2018
14
October, 2017
11
May, 2023
7
August, 2020
7
September, 2017
3
August, 2018
3
June, 2018
3
March, 2020
3
September, 2020
2
March, 2019
2
November, 2020
1
March, 2023
Available data
149
bam
149
bed narrowPeak
136
bigWig
89
tagAlign
46
fastq
14
bigBed narrowPeak
Organism
149
Homo sapiens
Biosample type
143
primary cell
5
in vitro differentiated cells
1
cell line
Organ
49
pancreas
38
epithelium
Project
85
T1D
64
AMP
Genome assembly (visualization)
187
hg19
149
GRCh38
Lab
84
Kyle Gaulton, UCSD
65
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
149 results
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Clear Filters
ChIP-seq
ATAC-seq
primary cell
monocyte
84
13
pancreatic ductal cell
13
4
pancreatic acinar cell
8
3
pancreatic endocrine cell
11
pancreatic beta cell
4
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in vitro differentiated cells
cardiomyocytes
3
pancreatic PP cell
2
cell line
EndoC_BH1
1
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