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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
3
DNase-seq
total RNA-seq
1
ATAC-seq
Assay category
20
DNA binding
4
DNA accessibility
Target of assay
18
histone
18
histone modification
10
narrow histone mark
8
broad histone mark
2
RNA binding protein
2
transcription factor
Date released
35
September, 2018
33
April, 2018
33
July, 2018
20
October, 2019
18
June, 2019
17
August, 2017
16
December, 2017
12
November, 2019
7
August, 2020
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2018
3
August, 2021
3
May, 2021
3
September, 2020
1
June, 2018
1
March, 2020
Available data
24
bam
24
bed narrowPeak
23
bigWig
17
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
fastq
2
bed bed3+
Organism
24
Homo sapiens
Biosample type
23
primary cell
1
cell line
Organ
223
liver
140
brain
48
limb
37
vasculature
35
blood vessel
27
nerve
24
epithelium
21
artery
16
kidney
12
vein
8
pancreas
5
heart
1
pituitary gland
Project
24
AMP
Genome assembly (visualization)
30
hg19
24
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
primary cell
endothelial cell of umbilical vein
10
2
epithelial cell of proximal tubule
6
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
Liver fetal (hepatocyte)
1
cell line
glomerular visceral epithelial cell
1
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