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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
total RNA-seq
7
ChIP-seq
2
Hi-C
1
DNase-seq
Assay category
28
DNA accessibility
7
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
267
November, 2017
176
June, 2019
127
August, 2017
89
May, 2021
82
October, 2019
71
November, 2018
63
May, 2019
62
December, 2017
49
April, 2018
48
July, 2018
47
July, 2019
45
February, 2023
45
May, 2020
42
April, 2019
39
May, 2022
35
November, 2019
34
August, 2021
34
October, 2018
31
September, 2018
30
December, 2018
29
February, 2021
18
January, 2019
16
March, 2020
12
October, 2017
8
February, 2018
7
September, 2017
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
2
November, 2020
Available data
35
bam
35
bed narrowPeak
8
bigWig
2
bedpe bed3+
2
hic
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
21
tissue
9
cell line
5
in vitro differentiated cells
2
primary cell
Organ
29
pancreas
9
epithelium
3
connective tissue
1
adipose tissue
Project
37
AMP
Genome assembly (visualization)
37
hg19
35
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
assay_title!
total RNA-seq
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
37 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
DNase-seq
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
7
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
osteoblast
1
1
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