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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
total RNA-seq
6
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
6
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
narrow histone mark
1
RNA binding protein
transcription factor
Date released
172
June, 2019
85
May, 2021
80
August, 2017
75
October, 2019
58
May, 2019
49
April, 2018
48
July, 2018
47
July, 2019
45
February, 2023
45
May, 2020
39
May, 2022
37
April, 2019
34
November, 2019
31
September, 2018
29
November, 2017
24
February, 2021
23
August, 2021
20
December, 2017
19
October, 2018
16
March, 2020
12
October, 2017
10
November, 2018
8
February, 2018
7
September, 2017
4
January, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
2
December, 2018
2
November, 2020
Available data
32
bam
32
bed narrowPeak
6
bigWig
2
bedpe bed3+
2
hic
Organism
34
Homo sapiens
Biosample type
21
tissue
8
cell line
5
in vitro differentiated cells
Organ
28
pancreas
8
epithelium
1
adipose tissue
1
connective tissue
Project
34
AMP
Genome assembly (visualization)
34
hg19
32
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
assay_title!
total RNA-seq
target.investigated_as!
narrow histone mark
transcription factor
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
6
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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