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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
Assay category
67
DNA binding
Target of assay
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
15
transcription factor
4
RNA binding protein
1
chromatin remodeller
Date released
406
November, 2017
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
88
November, 2018
80
April, 2019
74
October, 2018
67
December, 2017
64
July, 2019
49
April, 2018
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
34
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
67
bam
67
fastq
45
bed narrowPeak
45
bigWig
23
bigBed narrowPeak
15
bed bed3+
Organism
67
Homo sapiens
Biosample type
43
in vitro differentiated cells
21
tissue
3
stem cell
Organ
36
liver
19
epithelium
13
embryo
Project
67
AMP
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
67
AMP-T2D consortium
Audit category:
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_title!
total RNA-seq
audit.ERROR.category!
inconsistent control
month_released!
August, 2017
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
tissue
liver
11
right lobe of liver
10
stem cell
hESC
3
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