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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
96
ATAC-seq
50
ChIP-seq
1
pCHi-C
Assay category
96
DNA accessibility
50
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
396
November, 2017
283
August, 2017
266
October, 2019
242
August, 2021
196
May, 2021
192
June, 2019
174
May, 2022
147
May, 2020
117
May, 2019
103
February, 2023
89
December, 2017
86
February, 2021
85
November, 2018
80
April, 2019
74
October, 2018
62
July, 2019
49
April, 2018
47
September, 2023
43
September, 2020
42
July, 2018
40
May, 2024
36
March, 2020
35
December, 2018
25
January, 2019
24
February, 2018
20
November, 2019
19
April, 2020
18
October, 2017
16
January, 2021
15
September, 2018
14
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
6
November, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
December, 2019
2
June, 2018
1
August, 2022
Available data
91
bam
68
bigWig
50
tagAlign
27
bed narrowPeak
1
tsv
Organism
147
Homo sapiens
Biosample type
96
primary cell
50
tissue
1
cell line
Organ
51
liver
Project
147
AMP
Genome assembly (visualization)
68
hg19
19
GRCh38
Lab
147
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_title!
total RNA-seq
audit.ERROR.category!
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
lab.title!
Stephen Parker, UMich
BIOSAMPLE
ASSAY
147 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 21 more…
tissue
liver
50
cell line
HepG2
1
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