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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
46
ATAC-seq
5
DNase-seq
Assay category
61
DNA binding
51
DNA accessibility
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
39
May, 2019
35
February, 2023
21
October, 2019
12
February, 2021
3
June, 2019
2
July, 2019
Available data
112
bed narrowPeak
97
bam
70
bigWig
62
bigBed narrowPeak
7
tsv
6
tagAlign
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
112
Homo sapiens
Biosample type
100
tissue
primary cell
12
cell line
Organ
434
liver
192
brain
185
heart
161
kidney
146
pancreas
112
blood vessel
112
vasculature
92
limb
74
artery
58
connective tissue
54
blood
54
bodily fluid
51
musculature of body
45
epithelium
30
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
8
bone element
8
skeleton
1
pituitary gland
Project
112
AMP
Genome assembly (visualization)
112
GRCh38
77
hg19
Lab
112
AMP-T2D consortium
assay_title!
total RNA-seq
audit.ERROR.category!
inconsistent replicate
biosample_type!
primary cell
BIOSAMPLE
ASSAY
112 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
cell line
smooth muscle cell of the coronary artery
4
8
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