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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
66
DNA binding
7
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
60
transcription factor
20
RNA binding protein
16
recombinant protein
6
control
3
chromatin remodeller
3
other context
3
other post-translational modification
Date released
332
November, 2017
280
August, 2017
275
October, 2019
245
August, 2021
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
80
April, 2019
75
November, 2018
74
October, 2018
64
July, 2019
49
April, 2018
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
19
April, 2020
19
October, 2017
16
January, 2021
14
May, 2023
11
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2023
4
August, 2018
4
March, 2019
October, 2022
3
June, 2018
1
August, 2022
Available data
84
fastq
83
bam
76
bigWig
69
bed narrowPeak
69
bigBed narrowPeak
9
bed bed3+
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
75
Homo sapiens
Biosample type
57
cell line
17
tissue
1
primary cell
Organ
46
liver
15
blood
15
bodily fluid
8
spleen
5
pancreas
Project
75
AMP
Genome assembly (visualization)
66
GRCh38
58
hg19
Lab
75
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
inconsistent control run_type
assay_title!
total RNA-seq
audit.WARNING.category!
inconsistent control run_type
files.file_type!
bed broadPeak
month_released!
October, 2022
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
41
1
GM12878
15
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
primary cell
pancreatic cell
1
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