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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
625
ChIP-seq
Assay category
625
DNA binding
Target of assay
626
histone modification
625
histone
322
narrow histone mark
303
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
123
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
Available data
519
bigWig
517
bed narrowPeak
463
bam
312
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
619
Homo sapiens
Biosample type
625
tissue
153
primary cell
112
in vitro differentiated cells
36
cell line
2
stem cell
Organ
184
brain
95
heart
71
pancreas
69
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
625
AMP
T1D
Genome assembly (visualization)
491
GRCh38
435
hg19
Lab
590
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
assay_title!
total RNA-seq
award.project!
T1D
organ_slims!
esophagus
BIOSAMPLE
ASSAY
625 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
49
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
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