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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
32
DNA binding
14
DNA accessibility
1
Transcription
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
151
May, 2021
134
May, 2022
100
May, 2020
59
August, 2017
55
June, 2019
48
July, 2018
47
February, 2021
47
September, 2018
43
April, 2018
43
September, 2020
32
October, 2019
18
July, 2019
12
February, 2023
9
November, 2017
8
January, 2021
7
August, 2020
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
November, 2020
1
March, 2020
1
March, 2023
1
November, 2018
Available data
47
fastq
46
bam
46
bed narrowPeak
46
bigWig
14
bigBed narrowPeak
1
csv
Organism
47
Homo sapiens
Biosample type
47
primary cell
Organ
46
pancreas
35
epithelium
Project
47
AMP
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
47
AMP-T2D consortium
Audit category:
32
missing controlled_by
assay_title!
total RNA-seq
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
pancreatic acinar cell
8
3
pancreatic endocrine cell
11
pancreatic beta cell
4
pancreatic alpha cell
3
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