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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
47
WGBS
3
Hi-C
Assay category
97
DNA accessibility
85
Transcription
47
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
45
February, 2021
43
September, 2020
7
August, 2020
3
October, 2022
Available data
153
zippedFastqFolder
77
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
232
Homo sapiens
Biosample type
232
primary cell
Organ
99
epithelium
99
pancreas
Project
232
HPAP
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
467
AMP-T2D consortium
232
Klaus Kaestner, Upenn
141
Kyle Gaulton, UCSD
1
ITG
Audit category:
30
audit script error
assay_title!
total RNA-seq
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
232 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell
85
48
pancreatic alpha cell
29
31
1
pancreatic beta cell
16
16
1
pancreatic acinar cell
4
1
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