Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
total RNA-seq
16
pCHi-C
13
ATAC-seq
1
DNAme array
1
Hi-C
Assay category
121
DNA binding
13
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
151
May, 2021
134
May, 2022
100
May, 2020
59
August, 2017
55
June, 2019
48
July, 2018
47
February, 2021
47
September, 2018
43
April, 2018
43
September, 2020
32
October, 2019
18
July, 2019
12
February, 2023
9
November, 2017
8
January, 2021
7
August, 2020
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
November, 2020
1
March, 2020
1
March, 2023
1
November, 2018
0
November, 2019
Available data
127
bed narrowPeak
117
bigWig
97
bam
84
tagAlign
1
hic
Organism
152
Homo sapiens
Biosample type
152
primary cell
53
in vitro differentiated cells
34
cell line
22
tissue
2
stem cell
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
100
T1D
51
AMP
1
ITG
Genome assembly (visualization)
130
hg19
98
GRCh38
Lab
133
Kyle Gaulton, UCSD
18
AMP-T2D consortium
1
ITG
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
152 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
pCHi-C
ATAC-seq
DNAme array
Hi-C
primary cell
monocyte
85
1
13
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 11 more…
See all biosamples
Download