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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
163
DNase-seq
79
ATAC-seq
total RNA-seq
2
snATAC-seq
1
single cell RNA-seq
Assay category
244
DNA accessibility
1
Transcription
Date released
220
October, 2019
195
August, 2017
179
August, 2021
163
June, 2019
115
May, 2019
101
February, 2021
82
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
50
May, 2020
48
December, 2017
47
September, 2023
46
July, 2019
40
May, 2022
40
May, 2024
31
March, 2020
26
November, 2018
23
October, 2017
21
November, 2019
19
April, 2020
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
May, 2021
Available data
226
bed narrowPeak
163
bam
163
bed bed3+
163
bed broadPeak
163
bigBed broadPeak
163
bigBed narrowPeak
163
bigWig
5
bed bed3
Organism
245
Homo sapiens
Biosample type
245
tissue
67
primary cell
12
in vitro differentiated cells
6
cell line
Organ
68
kidney
63
heart
38
blood vessel
38
vasculature
37
artery
32
limb
32
musculature of body
30
eye
26
brain
18
ureter
17
pancreas
12
epithelium
4
bone element
4
skeleton
2
adipose tissue
2
connective tissue
Project
232
AMP
13
T1D
Genome assembly (visualization)
198
GRCh38
180
hg19
Lab
232
AMP-T2D consortium
13
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
month_released!
August, 2020
BIOSAMPLE
ASSAY
245 results
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DNase-seq
ATAC-seq
snATAC-seq
single cell RNA-seq
tissue
coronary artery
2
35
heart
18
1
retina
3
15
muscle of arm
17
brain
12
1
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