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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
95
ChIP-seq
7
WGBS
6
RRBS
1
DNase-seq
1
single cell RNA-seq
Assay category
95
DNA binding
13
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
76
histone
76
histone modification
48
broad histone mark
28
narrow histone mark
19
control
Date released
211
August, 2021
156
May, 2022
143
February, 2021
113
May, 2021
112
February, 2023
109
August, 2017
56
May, 2020
50
October, 2019
47
September, 2023
46
March, 2020
43
September, 2020
40
May, 2024
26
July, 2019
19
April, 2020
16
January, 2021
14
May, 2023
13
November, 2017
10
November, 2020
8
January, 2018
7
August, 2020
7
October, 2017
5
December, 2019
5
March, 2023
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
286
fastq
bam
263
bigWig
215
bed narrowPeak
115
bigBed narrowPeak
85
tagAlign
bed broadPeak
42
bed bed3+
24
bigBed broadPeak
13
bed bedMethyl
13
bigBed bedMethyl
1
csv
Organism
110
Homo sapiens
Biosample type
94
tissue
14
in vitro differentiated cells
2
primary cell
Organ
53
connective tissue
39
adipose tissue
28
liver
14
pancreas
13
musculature of body
Project
110
AMP
Genome assembly (visualization)
4
hg19
Lab
110
AMP-T2D consortium
assay_title!
total RNA-seq
files.file_type!
bam
bed broadPeak
BIOSAMPLE
ASSAY
110 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
single cell RNA-seq
tissue
subcutaneous abdominal adipose tissue
35
3
liver
23
3
1
islet of Langerhans
14
skeletal muscle tissue
9
4
adipose tissue
1
+ See 1 more…
in vitro differentiated cells
adipocyte
14
primary cell
pancreatic cell
1
skeletal muscle myoblast
1
See all biosamples
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