Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
single cell RNA-seq
5
Hi-C
total RNA-seq
1
pCHi-C
Assay category
6
Transcription
5
3D chromatin structure
Date released
6
August, 2021
3
March, 2020
2
July, 2019
1
October, 2019
Available data
bed narrowPeak
bam
92
bigWig
79
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
7
tsv
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
12
Homo sapiens
Biosample type
8
tissue
4
primary cell
Organ
184
pancreas
140
epithelium
103
heart
92
kidney
89
bone element
80
connective tissue
45
liver
44
adipose tissue
30
brain
24
musculature of body
20
lung
13
vasculature
12
blood vessel
9
blood
9
bodily fluid
8
eye
5
gonad
5
limb
5
ovary
4
skeleton
2
artery
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
5
hg19
Lab
12
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
total RNA-seq
files.file_type!
bam
bed narrowPeak
csv
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
Hi-C
pCHi-C
tissue
aorta
4
1
1
pulmonary artery
2
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
Download