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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
total RNA-seq
5
ChIP-seq
5
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
7
October, 2019
3
June, 2019
1
July, 2019
1
March, 2020
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
39
Homo sapiens
Biosample type
35
tissue
4
primary cell
Organ
539
liver
507
pancreas
356
epithelium
291
heart
231
brain
216
kidney
200
connective tissue
158
vasculature
156
blood vessel
97
bone element
90
adipose tissue
81
artery
79
limb
69
blood
69
bodily fluid
57
musculature of body
38
eye
36
nerve
24
spleen
23
embryo
20
lung
18
vein
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
39
AMP-T2D consortium
assay_title!
total RNA-seq
files.file_type!
bigBed broadPeak
month_released!
November, 2019
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
RRBS
tissue
retina
15
pigmented layer of retina
12
islet of Langerhans
1
2
4
adrenal gland
1
primary cell
retinal pigment epithelial cell
3
1
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