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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
total RNA-seq
16
snATAC-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
32
DNA binding
30
DNA accessibility
1
Transcription
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
406
November, 2017
322
August, 2017
280
October, 2019
243
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
April, 2018
48
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
40
May, 2024
39
November, 2019
37
March, 2020
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
47
fastq
46
bam
46
bed narrowPeak
46
bigWig
14
bigBed narrowPeak
1
csv
Organism
63
Homo sapiens
Biosample type
55
primary cell
8
tissue
Organ
54
pancreas
35
epithelium
8
blood
8
bodily fluid
Project
47
AMP
16
T1D
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
47
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
32
missing controlled_by
assay_title!
total RNA-seq
files.file_type!
hic
ibed
BIOSAMPLE
ASSAY
63 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
pancreatic acinar cell
8
3
pancreatic endocrine cell
11
peripheral blood mononuclear cell
8
pancreatic beta cell
4
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tissue
islet of Langerhans
4
pancreas
4
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