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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
7
DNase-seq
total RNA-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
47
DNA binding
10
DNA accessibility
Target of assay
39
histone
39
histone modification
26
broad histone mark
13
narrow histone mark
8
control
Date released
80
May, 2022
57
October, 2019
55
May, 2019
48
February, 2023
35
September, 2018
33
April, 2018
33
July, 2018
29
August, 2017
24
June, 2019
20
February, 2021
20
May, 2021
19
December, 2017
14
November, 2019
12
August, 2021
12
July, 2019
7
August, 2020
6
November, 2017
6
November, 2020
5
September, 2017
4
March, 2020
3
August, 2018
3
September, 2020
1
December, 2019
1
June, 2018
Available data
55
bam
43
bigWig
42
bed narrowPeak
34
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
hic
1
tar
Organism
57
Homo sapiens
Biosample type
30
primary cell
26
tissue
1
cell line
Organ
85
brain
65
limb
46
blood vessel
46
vasculature
38
nerve
31
epithelium
26
artery
24
kidney
20
vein
18
pancreas
7
eye
6
liver
5
heart
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
57
AMP
Genome assembly (visualization)
44
hg19
41
GRCh38
Lab
57
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
files.file_type!
hic
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
epithelial cell of proximal tubule
7
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
tissue
tibial artery
23
2
1
cell line
glomerular visceral epithelial cell
1
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