Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
48
single cell RNA-seq
3
Hi-C
1
MPRA
Assay category
48
Transcription
3
3D chromatin structure
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
April, 2018
48
July, 2018
47
March, 2020
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
48
bam
48
bigWig
48
fastq
48
tsv
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
51
Homo sapiens
Biosample type
51
primary cell
1
cell line
Organ
40
pancreas
36
epithelium
2
connective tissue
Project
49
AMP
3
HPAP
Genome assembly (visualization)
51
hg19
48
GRCh38
Lab
49
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
3
audit script error
assay_title!
total RNA-seq
files.file_type!
ibed
month_released!
June, 2019
BIOSAMPLE
ASSAY
52 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
Hi-C
MPRA
primary cell
pancreatic beta cell
9
1
pancreatic alpha cell
7
1
pancreatic acinar cell
5
1
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
MIN6
1
See all biosamples
Download