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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
49
ATAC-seq
41
WGBS
3
Hi-C
Assay category
49
DNA accessibility
41
DNA methylation
3
3D chromatin structure
Date released
80
May, 2022
7
August, 2020
February, 2021
3
October, 2022
3
September, 2020
Available data
80
zippedFastqFolder
10
bigWig
10
fastq
3
bedpe bed3+
3
cool
3
hic
Organism
93
Homo sapiens
Biosample type
93
primary cell
Organ
93
epithelium
93
pancreas
Project
93
HPAP
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
281
AMP-T2D consortium
93
Klaus Kaestner, Upenn
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
audit script error
assay_title!
total RNA-seq
files.file_type!
tagAlign
month_released!
February, 2021
BIOSAMPLE
ASSAY
93 results
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ATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
29
25
1
pancreatic beta cell
16
16
1
pancreatic acinar cell
4
1
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