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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
ChIP-seq
Assay category
397
DNA binding
Target of assay
239
transcription factor
86
histone
86
histone modification
69
control
66
recombinant protein
50
broad histone mark
36
narrow histone mark
34
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
397
November, 2017
293
August, 2017
252
October, 2019
238
August, 2021
198
June, 2019
197
May, 2021
164
February, 2021
151
May, 2020
115
May, 2019
99
February, 2023
94
May, 2022
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
56
July, 2019
47
September, 2023
45
March, 2020
40
May, 2024
40
September, 2020
35
December, 2018
26
November, 2019
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
July, 2018
14
May, 2023
12
September, 2018
8
January, 2018
6
November, 2020
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
386
bam
328
bigWig
318
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
tar
Organism
397
Homo sapiens
Biosample type
312
cell line
82
tissue
3
primary cell
Organ
312
liver
91
brain
epithelium
6
vasculature
3
blood vessel
Project
397
AMP
Genome assembly (visualization)
276
GRCh38
272
hg19
Lab
397
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
assay_title!
total RNA-seq
files.file_type!
tar
vcf
organ_slims!
epithelium
BIOSAMPLE
ASSAY
397 results
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Clear Filters
ChIP-seq
cell line
HepG2
312
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
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