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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
17
ChIP-seq
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
33
DNA accessibility
17
DNA binding
2
Transcription
1
DNA methylation
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
3
control
Date released
43
June, 2019
7
May, 2019
3
July, 2019
Available data
64
bigWig
60
bed narrowPeak
53
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
3
tsv
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
53
Homo sapiens
Biosample type
41
tissue
12
primary cell
Organ
522
liver
359
pancreas
241
epithelium
238
brain
142
heart
133
kidney
127
vasculature
126
connective tissue
122
blood vessel
110
limb
60
blood
60
bodily fluid
53
musculature of body
48
artery
47
adipose tissue
38
nerve
24
spleen
22
embryo
20
vein
18
ureter
8
bone element
8
skeleton
7
eye
1
pituitary gland
Project
53
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
53
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
assay_title!
total RNA-seq
files.file_type!
bedpe bed3+
hdf5
BIOSAMPLE
ASSAY
53 results
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Clear Filters
DNase-seq
ChIP-seq
small RNA-seq
WGBS
tissue
muscle of leg
13
7
1
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
skeletal muscle tissue
1
primary cell
skeletal muscle satellite cell
8
1
skeletal muscle cell
1
2
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