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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
DNase-seq
2
Hi-C
Assay category
10
DNA accessibility
2
3D chromatin structure
Date released
5
June, 2019
4
October, 2019
2
July, 2019
1
November, 2018
Available data
146
bam
143
bed narrowPeak
108
bigWig
92
bigBed narrowPeak
27
fastq
14
bed broadPeak
14
bigBed broadPeak
12
bed bed3+
8
tsv
6
tagAlign
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
12
Homo sapiens
Biosample type
6
primary cell
6
tissue
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
12
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
12
AMP-T2D consortium
assay_title!
total RNA-seq
files.file_type!
csv
BIOSAMPLE
ASSAY
12 results
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DNase-seq
Hi-C
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
spleen
1
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