Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
DNase-seq
6
ChIP-seq
Assay category
110
DNA accessibility
6
DNA binding
Target of assay
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
108
June, 2019
6
November, 2017
2
November, 2018
Available data
386
bed narrowPeak
371
bam
337
bigWig
231
bigBed narrowPeak
125
bed broadPeak
118
tagAlign
116
bigBed broadPeak
113
bed bed3+
64
xls
23
tsv
21
fastq
13
txt
6
bed bedMethyl
6
bigBed bedMethyl
5
csv
3
hdf5
1
bed bed3
1
hic
1
tagAlign bed3+
Organism
116
Homo sapiens
Biosample type
95
tissue
21
primary cell
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
0
stomach
Project
116
AMP
Genome assembly (visualization)
116
GRCh38
99
hg19
Lab
116
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
116 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
+ See 17 more…
primary cell
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 8 more…
See all biosamples
Download