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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
10
DNA accessibility
3
DNA binding
Target of assay
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
5
June, 2019
5
October, 2019
3
May, 2019
November, 2017
Available data
63
bed narrowPeak
50
bam
23
bigWig
13
bigBed narrowPeak
11
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
tsv
6
tagAlign
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
13
Homo sapiens
Biosample type
8
tissue
5
primary cell
Organ
87
liver
82
kidney
53
blood
53
bodily fluid
45
epithelium
42
pancreas
38
heart
36
limb
33
brain
33
musculature of body
19
connective tissue
18
ureter
15
vasculature
13
blood vessel
9
adipose tissue
7
spleen
5
artery
5
eye
3
vein
2
nerve
Project
13
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
13
AMP-T2D consortium
assay_title!
total RNA-seq
month_released!
November, 2017
target.investigated_as!
histone
BIOSAMPLE
ASSAY
13 results
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DNase-seq
ChIP-seq
FAIRE-seq
tissue
coronary artery
2
1
ascending aorta
1
1
tibial artery
2
thoracic aorta
1
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
kidney capillary endothelial cell
1
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