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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
39
ChIP-seq
2
WGBS
Assay category
39
DNA binding
2
DNA methylation
Target of assay
23
transcription factor
15
histone
15
histone modification
10
narrow histone mark
5
broad histone mark
1
RNA binding protein
1
control
Date released
49
April, 2018
48
July, 2018
45
May, 2020
41
August, 2017
34
July, 2019
22
November, 2017
8
January, 2018
8
May, 2021
7
August, 2020
7
November, 2018
6
October, 2019
4
March, 2020
3
August, 2018
3
June, 2018
3
September, 2020
2
October, 2017
1
February, 2023
Available data
198
fastq
193
bam
183
bigWig
bed narrowPeak
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
41
Homo sapiens
Biosample type
23
tissue
13
primary cell
5
in vitro differentiated cells
Organ
21
pancreas
19
connective tissue
14
adipose tissue
Project
41
AMP
Genome assembly (visualization)
40
GRCh38
39
hg19
Lab
41
AMP-T2D consortium
Audit category:
38
missing controlled_by
assay_title!
total RNA-seq
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
WGBS
tissue
white adipose tissue
12
islet of Langerhans
9
adipose tissue
2
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
1
in vitro differentiated cells
adipocyte
5
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