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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
27
ChIP-seq
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
WGBS
Assay category
34
DNA accessibility
27
DNA binding
2
Transcription
1
DNA methylation
Target of assay
27
histone
27
histone modification
16
broad histone mark
11
narrow histone mark
Date released
41
June, 2019
13
August, 2017
6
May, 2019
3
July, 2019
1
January, 2018
Available data
64
bigWig
60
bed narrowPeak
53
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
3
tsv
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
64
Homo sapiens
Biosample type
54
tissue
10
primary cell
Organ
463
liver
299
pancreas
225
epithelium
217
brain
155
heart
120
kidney
103
connective tissue
97
vasculature
92
blood vessel
87
limb
64
musculature of body
55
blood
55
bodily fluid
31
artery
30
adipose tissue
27
nerve
18
ureter
16
spleen
15
embryo
15
vein
6
eye
1
pituitary gland
0
skin of body
Project
64
AMP
Genome assembly (visualization)
63
hg19
49
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
64 results
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Clear Filters
DNase-seq
ChIP-seq
small RNA-seq
ATAC-seq
WGBS
tissue
muscle of leg
13
6
1
muscle of arm
17
skeletal muscle tissue
13
1
1
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle satellite cell
7
1
skeletal muscle cell
1
1
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