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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
4
single cell RNA-seq
3
pCHi-C
3
small RNA-seq
Assay category
7
Transcription
Date released
3
July, 2019
3
March, 2020
2
April, 2018
2
July, 2018
Available data
126
bam
103
bigWig
101
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
10
tsv
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
10
Homo sapiens
Biosample type
5
primary cell
4
tissue
1
stem cell
Organ
96
heart
91
pancreas
78
epithelium
13
kidney
9
brain
9
connective tissue
7
blood vessel
7
vasculature
5
liver
4
adipose tissue
3
musculature of body
2
artery
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
10
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
month_released!
September, 2020
BIOSAMPLE
ASSAY
10 results
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Clear Filters
single cell RNA-seq
pCHi-C
small RNA-seq
primary cell
pancreatic stellate cell
4
mesenchymal stem cell of adipose
1
tissue
adipose tissue
1
omental fat pad
1
sigmoid colon
1
subcutaneous adipose tissue
1
stem cell
mesenchymal stem cell
1
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