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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
133
ChIP-seq
total RNA-seq
28
single cell RNA-seq
26
ATAC-seq
11
WGBS
Assay category
133
DNA binding
28
Transcription
26
DNA accessibility
11
DNA methylation
Target of assay
104
transcription factor
26
control
18
RNA binding protein
3
chromatin remodeller
Date released
39
November, 2017
32
December, 2018
27
October, 2018
18
May, 2022
17
April, 2018
17
November, 2018
13
August, 2017
8
January, 2019
8
July, 2018
6
February, 2021
6
October, 2017
4
December, 2017
2
September, 2020
1
June, 2018
Available data
196
fastq
188
bam
144
bigWig
126
bed narrowPeak
102
bigBed narrowPeak
32
tsv
3
bed bedMethyl
3
bigBed bedMethyl
2
bed bed3+
2
zippedFastqFolder
Organism
198
Homo sapiens
Biosample type
88
cell line
76
tissue
34
primary cell
Organ
60
pancreas
49
liver
45
blood
45
bodily fluid
26
adipose tissue
26
connective tissue
24
epithelium
8
spleen
Project
190
AMP
8
HPAP
Genome assembly (visualization)
159
hg19
144
GRCh38
Lab
172
AMP-T2D consortium
18
Kyle Gaulton, UCSD
8
Klaus Kaestner, Upenn
Audit category:
7
missing controlled_by
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
198 results
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ChIP-seq
single cell RNA-seq
ATAC-seq
WGBS
cell line
GM12878
45
HepG2
43
tissue
islet of Langerhans
18
body of pancreas
13
4
subcutaneous adipose tissue
8
1
spleen
7
1
omental fat pad
6
1
+ See 5 more…
primary cell
pancreatic alpha cell
4
6
mesenchymal cell
4
pancreatic beta cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
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