Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
13
ATAC-seq
total RNA-seq
Assay category
60
DNA binding
13
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
8
February, 2021
4
February, 2023
1
January, 2018
Available data
68
bam
62
bed narrowPeak
60
fastq
55
bigWig
54
bigBed narrowPeak
4
bed bed3
Organism
73
Homo sapiens
Biosample type
61
cell line
12
tissue
Organ
602
liver
502
pancreas
392
epithelium
321
heart
294
kidney
269
brain
208
connective tissue
175
vasculature
169
blood vessel
115
limb
96
bone element
92
adipose tissue
90
musculature of body
85
artery
61
blood
61
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
19
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
thymus
1
urinary bladder
Project
73
AMP
Genome assembly (visualization)
67
hg19
62
GRCh38
Lab
73
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
total RNA-seq
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
73 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
cell line
GM12878
60
1
tissue
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 7 more…
See all biosamples
Download