Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
38
ChIP-seq
total RNA-seq
Assay category
187
DNA accessibility
38
DNA binding
Target of assay
25
histone
25
histone modification
13
narrow histone mark
12
broad histone mark
9
control
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
80
April, 2019
74
October, 2018
73
November, 2018
64
July, 2019
49
April, 2018
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
24
February, 2018
23
October, 2017
14
May, 2023
12
November, 2020
11
September, 2017
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
7
January, 2019
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
225
bam
216
bed narrowPeak
216
bigBed narrowPeak
216
bigWig
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
7
fastq
Organism
225
Homo sapiens
Biosample type
170
tissue
55
primary cell
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
epithelium
blood
18
bodily fluid
18
connective tissue
18
ureter
7
eye
7
spleen
7
vasculature
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
225
AMP
Genome assembly (visualization)
216
GRCh38
193
hg19
Lab
225
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
assay_title!
total RNA-seq
lab.title!
Xin Sun, UCSD
organ_slims!
blood
BIOSAMPLE
ASSAY
225 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 35 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
See all biosamples
Download