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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
single cell RNA-seq
5
ATAC-seq
2
Capture-C
Assay category
47
Transcription
5
DNA accessibility
Date released
47
September, 2023
4
August, 2021
3
February, 2023
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
Organism
54
Homo sapiens
Biosample type
47
tissue
7
in vitro differentiated cells
Organ
47
kidney
4
connective tissue
Project
47
KPMP
7
AMP
Genome assembly (visualization)
7
hg19
Lab
2629
AMP-T2D consortium
232
Klaus Kaestner, Upenn
228
Kyle Gaulton, UCSD
93
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
month_released!
August, 2018
organ_slims!
nerve
BIOSAMPLE
ASSAY
54 results
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single cell RNA-seq
ATAC-seq
Capture-C
tissue
kidney
47
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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