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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
12
DNA accessibility
Date released
92
February, 2021
4
February, 2023
1
May, 2021
Available data
84
txt
8
bam
8
bed narrowPeak
4
bed bed3
Organism
97
Homo sapiens
Biosample type
96
tissue
1
primary cell
Organ
558
liver
435
pancreas
329
epithelium
229
heart
198
kidney
169
brain
129
connective tissue
123
vasculature
119
blood vessel
97
bone element
69
artery
69
blood
69
bodily fluid
49
adipose tissue
49
limb
35
eye
31
musculature of body
22
nerve
21
spleen
20
lung
19
embryo
13
vein
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
96
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
96
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_title!
total RNA-seq
month_released!
June, 2019
October, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
97 results
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RNA microarray
ATAC-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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primary cell
megakaryocyte
1
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