Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
6
DNase-seq
total RNA-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
75
DNA binding
9
DNA accessibility
1
3D chromatin structure
Target of assay
57
histone
57
histone modification
39
broad histone mark
18
control
18
narrow histone mark
Date released
85
October, 2019
50
May, 2019
35
February, 2023
14
February, 2021
7
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
3
March, 2020
0
August, 2018
Available data
84
bam
63
bigWig
61
bed narrowPeak
59
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
1
hic
1
tar
Organism
85
Homo sapiens
Biosample type
64
tissue
21
primary cell
Organ
85
brain
65
limb
47
blood vessel
47
vasculature
38
nerve
35
epithelium
26
artery
24
kidney
21
pancreas
21
vein
7
eye
6
heart
6
liver
5
connective tissue
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
Project
85
AMP
Genome assembly (visualization)
64
hg19
60
GRCh38
Lab
85
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
85 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
Download