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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
total RNA-seq
3
ATAC-seq
Assay category
43
Transcription
3
DNA accessibility
Date released
406
November, 2017
283
October, 2019
265
August, 2017
244
August, 2021
217
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
61
July, 2019
51
October, 2018
49
April, 2018
48
July, 2018
48
March, 2020
47
September, 2018
47
September, 2023
43
September, 2020
40
May, 2024
40
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
28
fastq
19
zippedFastqFolder
6
bigWig
3
bam
3
tsv
Organism
46
Homo sapiens
Biosample type
46
primary cell
Organ
6
epithelium
6
pancreas
adipose tissue
1
connective tissue
Project
43
HPAP
3
AMP
Genome assembly (visualization)
6
GRCh38
3
hg19
Lab
43
Klaus Kaestner, Upenn
3
AMP-T2D consortium
assay_title!
total RNA-seq
month_released!
May, 2019
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
46 results
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Clear Filters
single cell RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
2
2
pancreatic acinar cell
1
pancreatic beta cell
1
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