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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
total RNA-seq
4
ATAC-seq
1
Hi-C
Assay category
65
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
42
histone
42
histone modification
24
broad histone mark
19
transcription factor
18
narrow histone mark
11
RNA binding protein
6
chromatin remodeller
4
control
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
April, 2018
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
61
bed narrowPeak
61
bigWig
26
bam
26
fastq
21
bigBed narrowPeak
1
bed broadPeak
1
bedpe
1
hic
Organism
70
Homo sapiens
Biosample type
52
tissue
18
cell line
Organ
40
heart
18
blood
18
bodily fluid
7
spleen
5
pancreas
Project
70
AMP
Genome assembly (visualization)
63
GRCh38
24
hg19
Lab
40
Patrick T. Ellinor, Broad
25
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
left cardiac atrium
40
spleen
7
islet of Langerhans
4
1
cell line
GM12878
18
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