Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
15
small RNA-seq
14
RRBS
12
WGBS
7
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
26
DNA methylation
18
Transcription
8
DNA accessibility
7
3D chromatin structure
Target of assay
3
control
Date released
406
November, 2017
280
October, 2019
240
August, 2021
216
May, 2021
200
June, 2019
197
August, 2017
174
May, 2022
164
February, 2021
151
May, 2020
120
May, 2019
102
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
59
July, 2019
51
October, 2018
47
April, 2018
47
March, 2020
47
September, 2018
47
September, 2023
46
July, 2018
43
September, 2020
40
May, 2024
40
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
November, 2020
7
August, 2020
7
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
37
bigWig
35
bam
22
bed bedMethyl
22
bigBed bedMethyl
18
tsv
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
59
Homo sapiens
Biosample type
44
tissue
15
primary cell
Organ
15
heart
14
brain
8
epithelium
8
musculature of body
7
vasculature
6
blood vessel
6
kidney
6
liver
connective tissue
5
limb
4
pancreas
3
adipose tissue
1
artery
1
eye
1
pericardium
Project
59
AMP
Genome assembly (visualization)
42
hg19
32
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
month_released!
October, 2017
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
59 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
RRBS
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
right lobe of liver
2
1
aorta
2
body of pancreas
2
+ See 22 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac muscle cell
1
+ See 9 more…
See all biosamples
Download