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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ATAC-seq
74
single cell RNA-seq
total RNA-seq
41
WGBS
22
snATAC-seq
Assay category
102
DNA accessibility
74
Transcription
41
DNA methylation
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
April, 2018
49
March, 2020
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
153
zippedFastqFolder
43
fastq
38
bed narrowPeak
23
bigWig
18
bam
1
bed bed3+
1
txt
Organism
217
Homo sapiens
Biosample type
177
primary cell
40
tissue
Organ
101
pancreas
83
epithelium
20
liver
2
musculature of body
Project
177
HPAP
40
AMP
Genome assembly (visualization)
39
hg19
3
GRCh38
Lab
177
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
total RNA-seq
month_released!
July, 2018
BIOSAMPLE
ASSAY
217 results
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Clear Filters
ATAC-seq
single cell RNA-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
73
21
pancreatic alpha cell
24
25
pancreatic beta cell
14
16
pancreatic acinar cell
4
tissue
liver
20
islet of Langerhans
18
skeletal muscle tissue
1
1
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