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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
7
DNase-seq
total RNA-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
59
DNA binding
10
DNA accessibility
1
3D chromatin structure
Target of assay
45
histone
45
histone modification
28
broad histone mark
17
narrow histone mark
14
control
Date released
80
May, 2022
70
October, 2019
35
September, 2018
33
April, 2018
33
July, 2018
29
August, 2017
20
June, 2019
20
May, 2021
19
December, 2017
15
November, 2019
13
February, 2023
8
July, 2019
7
August, 2020
6
August, 2021
6
February, 2021
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
4
March, 2020
3
August, 2018
3
October, 2022
3
September, 2020
1
December, 2019
June, 2018
Available data
67
bam
49
bigWig
48
bed narrowPeak
40
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
1
hic
1
tar
Organism
70
Homo sapiens
Biosample type
38
tissue
31
primary cell
1
cell line
Organ
85
brain
65
limb
47
blood vessel
47
vasculature
38
nerve
32
epithelium
26
artery
24
kidney
21
vein
18
pancreas
7
eye
6
heart
6
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
70
AMP
Genome assembly (visualization)
51
hg19
47
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_title!
total RNA-seq
month_released!
June, 2018
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial nerve
35
2
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
glomerular visceral epithelial cell
1
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