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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • total RNA-seq
  • 45ATAC-seq
  • 34ChIP-seq
  • 4DNase-seq
  • 2single cell RNA-seq
Assay category
  • 49DNA accessibility
  • 34DNA binding
  • 2Transcription
Target of assay
  • 20histone
  • 20histone modification
  • 14broad histone mark
  • 9control
  • 6narrow histone mark
  • 5transcription factor
  • 1RNA binding protein
Date released
  • 35February, 2023
  • 26October, 2019
  • 14February, 2021
  • 5May, 2019
  • 2August, 2021
  • 2June, 2019
  • 1July, 2019
Available data
  • 74bed narrowPeak
  • 48bam
  • 31bigWig
  • 25bigBed narrowPeak
  • 6tagAlign
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 2tsv
Organism
  • 85Homo sapiens
Biosample type
  • 71tissue
  • 14cell line
Organ
  • 602liver
  • 549pancreas
  • 393epithelium
  • 321heart
  • 294kidney
  • 269brain
  • 210connective tissue
  • 175vasculature
  • 169blood vessel
  • 115limb
  • 97bone element
  • 93adipose tissue
  • 90musculature of body
  • 85artery
  • 69blood
  • 69bodily fluid
  • 42eye
  • 38nerve
  • 25spleen
  • 23embryo
  • 22vein
  • 20lung
  • 18ureter
  • 12skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1skin of body
  • 1small intestine
  • 1stomach
  • 1urinary bladder
Project
  • 85AMP
Genome assembly (visualization)
  • 74GRCh38
  • 39hg19
Lab
  • 85AMP-T2D consortium
assay_title!
  • total RNA-seq
BIOSAMPLE
ASSAY

85 results

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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery3652
tibial artery1232
pulmonary artery2
cell line
smooth muscle cell of the coronary artery86
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