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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
total RNA-seq
5
ChIP-seq
5
pCHi-C
4
DNase-seq
1
RRBS
Assay category
32
DNA accessibility
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
7
June, 2019
7
October, 2019
1
July, 2019
1
March, 2020
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
43
Homo sapiens
Biosample type
38
tissue
5
primary cell
Organ
602
liver
549
pancreas
393
epithelium
321
heart
294
kidney
269
brain
210
connective tissue
175
vasculature
169
blood vessel
limb
97
bone element
93
adipose tissue
90
musculature of body
85
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
34
hg19
6
GRCh38
Lab
43
AMP-T2D consortium
assay_title!
total RNA-seq
organ_slims!
esophagus
limb
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
DNase-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
2
4
sigmoid colon
1
primary cell
retinal pigment epithelial cell
3
1
1
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