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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 28ATAC-seq
  • total RNA-seq
  • 5ChIP-seq
  • 4DNase-seq
  • 4pCHi-C
  • 1RRBS
Assay category
  • 32DNA accessibility
  • 5DNA binding
  • 1DNA methylation
Target of assay
  • 3histone
  • 3histone modification
  • 3narrow histone mark
  • 1RNA binding protein
  • 1control
  • 1transcription factor
Date released
  • 27February, 2023
  • 7June, 2019
  • 7October, 2019
  • 1July, 2019
Available data
  • 33bed narrowPeak
  • 7bam
  • 6bigBed narrowPeak
  • 6bigWig
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 42Homo sapiens
Biosample type
  • 37tissue
  • 5primary cell
Organ
  • 602liver
  • 549pancreas
  • 393epithelium
  • 321heart
  • 294kidney
  • 269brain
  • 210connective tissue
  • 175vasculature
  • 169blood vessel
  • 115limb
  • 97bone element
  • 93adipose tissue
  • 90musculature of body
  • 85artery
  • 69blood
  • 69bodily fluid
  • 42eye
  • 38nerve
  • 25spleen
  • 23embryo
  • 22vein
  • 20lung
  • 18ureter
  • 12skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pericardium
  • 1skin of body
  • 1small intestine
  • 1stomach
  • 1urinary bladder
Project
  • 42AMP
Genome assembly (visualization)
  • 34hg19
  • 6GRCh38
Lab
  • 42AMP-T2D consortium
assay_title!
  • total RNA-seq
BIOSAMPLE
ASSAY

42 results

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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
retina153
pigmented layer of retina12
islet of Langerhans124
primary cell
retinal pigment epithelial cell311
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