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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
total RNA-seq
2
DNase-seq
1
ATAC-seq
1
pCHi-C
Assay category
35
DNA binding
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
38
October, 2019
1
March, 2020
Available data
38
bam
27
bed narrowPeak
27
bigWig
26
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tsv
Organism
39
Homo sapiens
Biosample type
38
tissue
1
cell line
Organ
602
liver
549
pancreas
393
epithelium
321
heart
294
kidney
269
brain
210
connective tissue
175
vasculature
169
blood vessel
115
limb
97
bone element
93
adipose tissue
90
musculature of body
85
artery
69
blood
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
39
AMP-T2D consortium
assay_title!
total RNA-seq
organ_slims!
bodily fluid
large intestine
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
2
1
cell line
MCF-7
1
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