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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • total RNA-seq
  • 366single cell RNA-seq
  • 86RNA microarray
  • 18small RNA-seq
  • 10MeRIP-seq
  • 5STARR-seq
  • 3snDrop-seq
Assay category
  • 384Transcription
Target of assay
  • 5control
  • 5nucleotide modification
Date released
  • 111August, 2021
  • 105February, 2021
  • 49April, 2018
  • 48July, 2018
  • 47September, 2023
  • 40September, 2020
  • 34May, 2022
  • 18July, 2019
  • 10November, 2020
  • 9April, 2020
  • 5December, 2019
  • 3August, 2018
  • 3June, 2018
  • 3May, 2023
  • 1February, 2023
  • 1November, 2018
  • 1September, 2018
Available data
  • 231tsv
  • 134fastq
  • 121bam
  • 121bigWig
  • 97txt
  • 52zippedFastqFolder
  • 8csv
Organism
  • 488Homo sapiens
Biosample type
  • 289tissue
  • 186primary cell
  • 11cell line
  • 2in vitro differentiated cells
Organ
  • 94heart
  • 92pancreas
  • 84bone element
  • 77epithelium
  • 72kidney
  • 9lung
  • 7connective tissue
  • 6blood vessel
  • 6liver
  • 6vasculature
  • 4brain
  • 3adipose tissue
  • 3musculature of body
  • 2artery
Project
  • 347AMP
  • 85HPAP
  • 47KPMP
  • 9LungMap
Genome assembly (visualization)
  • 121GRCh38
  • 121hg19
Lab
  • 321AMP-T2D consortium
  • 85Klaus Kaestner, Upenn
  • 47KPMP
  • 11Katalin Susztak, Upenn
  • 10Rohit N. Kulkarni, M.D., Ph.D.
  • 9Xin Sun, UCSD
  • 5Bing Ren, UCSD
Audit category:
  • 100inconsistent ontology term
  • 9audit script error
assay_title!
  • total RNA-seq
BIOSAMPLE
ASSAY

488 results

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Clear Filters
single cell RNA-seq
RNA microarray
small RNA-seq
MeRIP-seq
STARR-seq
snDrop-seq
tissue
bone element84
kidney64
heart left ventricle18
left cardiac atrium18
right cardiac atrium18
primary cell
Langerhans cell85
pancreatic acinar cell12
pancreatic alpha cell12
pancreatic beta cell12
pancreatic delta cell11
cell line
EndoC_BH16
HEK293T2
HepG22
Synthesized DNA1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
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