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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ATAC-seq
16
ChIP-seq
15
total RNA-seq
Assay category
74
DNA accessibility
16
DNA binding
15
Transcription
Target of assay
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
Date released
568
February, 2021
280
November, 2017
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
90
bed narrowPeak
64
xls
41
bam
31
bigWig
16
tagAlign
15
tsv
3
bed bed3+
Organism
105
Homo sapiens
Biosample type
64
tissue
30
in vitro differentiated cells
8
cell line
3
primary cell
Organ
64
kidney
8
embryo
3
epithelium
3
liver
Project
105
AMP
Genome assembly (visualization)
105
GRCh38
60
hg19
Lab
64
Katalin Susztak, Upenn
41
AMP-T2D consortium
assay_title!
whole genome sequencing assay
month_released!
May, 2021
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
tissue
kidney
64
in vitro differentiated cells
neural progenitor cell
10
13
7
cell line
H1-hESC
8
primary cell
hepatocyte
3
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