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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
33
histone
33
histone modification
19
narrow histone mark
15
control
14
broad histone mark
14
transcription factor
7
recombinant protein
4
RNA binding protein
3
nucleotide modification
Date released
8
June, 2019
4
November, 2019
2
December, 2017
2
October, 2019
1
March, 2020
1
May, 2019
1
May, 2021
Available data
19
bam
19
bed narrowPeak
19
bigWig
9
bigBed narrowPeak
2
fastq
Organism
19
Homo sapiens
Biosample type
9
primary cell
6
cell line
2
in vitro differentiated cells
2
tissue
Organ
10
epithelium
6
pancreas
4
connective tissue
3
musculature of body
2
brain
2
embryo
2
heart
2
kidney
Project
17
AMP
2
T1D
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
19
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
whole genome sequencing assay
organ_slims!
spleen
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
3
cardiac fibroblast
2
mesenchymal stem cell
2
epithelial cell of proximal tubule
1
kidney epithelial cell
1
cell line
EndoC_BH1
6
in vitro differentiated cells
Hepatic endoderm
2
tissue
brodmann area 43
1
insular gyrus
1
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