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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
58
total RNA-seq
8
ATAC-seq
1
pCHi-C
Assay category
58
Transcription
8
DNA accessibility
Date released
150
February, 2021
February, 2023
1
May, 2021
Available data
84
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
Organism
151
Homo sapiens
Biosample type
150
tissue
1
primary cell
Organ
799
pancreas
642
connective tissue
480
adipose tissue
432
liver
396
epithelium
263
heart
250
kidney
158
brain
151
bone element
vasculature
116
blood vessel
81
artery
49
musculature of body
38
limb
37
embryo
24
eye
20
lung
17
nerve
15
blood
15
bodily fluid
12
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
150
AMP
1
T1D
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
150
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_title!
whole genome sequencing assay
files.file_type!
bigBed narrowPeak
month_released!
February, 2023
organ_slims!
vasculature
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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primary cell
megakaryocyte
1
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