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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
DNase-seq
3
WGBS
Assay category
70
DNA binding
7
DNA accessibility
3
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
546
February, 2021
392
November, 2017
283
May, 2020
236
October, 2019
233
May, 2021
196
June, 2019
118
May, 2019
114
August, 2017
94
December, 2017
80
November, 2018
79
April, 2019
78
July, 2019
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
23
October, 2018
11
July, 2018
11
October, 2017
10
April, 2018
10
March, 2020
6
November, 2019
6
November, 2020
5
December, 2019
2
June, 2018
Available data
81
fastq
80
bam
73
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
80
Homo sapiens
Biosample type
61
cell line
19
tissue
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
80
AMP
Genome assembly (visualization)
73
GRCh38
68
hg19
Lab
80
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
whole genome sequencing assay
organ_slims!
pancreas
ureter
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
brain
2
omental fat pad
1
right lobe of liver
1
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